ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1t8iA1 - ECOD Domain | ECOD

ECOD/Domains/e1t8iA1

e1t8iA1

UID: 000044280

PDB

Range: A:213-229,A:320-430
PDB: 1T8I chain A(all domains)
UniProt: P11387 (all domains)
Gene: TOP1

Molecule: DNA topoisomerase I

3D Structure

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Related Domains

Browse other domains in Topoisom_I_N →

Classification

AArchitecturebeta complex topology(a.5)

XX-groupBeta-strand domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment(4039)

HH-groupBeta-strand domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment(4039.1)

TT-groupBeta-strand domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment(4039.1.1)

FFamilyTopoisom_I_N(4039.1.1.1)

Ligands

in contact, ≤ 4 Å

CamptothecinEHD
drugDrugBank DB04690

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02919Topoisom_I_N

Eukaryotic DNA topoisomerase I, DNA binding fragment

External Links

ECOD PDB View: 1T8I RCSB PDB: 1T8I PDBe: 1T8I UniProt: P11387

Downloads

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