ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1okeB2 - ECOD Domain | ECOD

ECOD/Domains/e1okeB2

e1okeB2

UID: 000044340

PDB

Range: B:1-297
PDB: 1OKE chain B(all domains)
UniProt: P12823 (all domains)

Molecule: MAJOR ENVELOPE PROTEIN E

3D Structure

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Related Domains

Browse other domains in Flavi_glycoprot →

Classification

AArchitecturebeta complex topology(a.5)

XX-groupViral glycoprotein, central and dimerisation domains-like(5090)

HH-groupViral glycoprotein, central and dimerisation domains(5090.1)

TT-groupViral glycoprotein, central and dimerisation domains(5090.1.1)

FFamilyFlavi_glycoprot(5090.1.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

+ 1 additive (octyl beta-D-glucopyranoside)

octyl beta-D-glucopyranosideBOG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00869Flavi_glycoprot

Flavivirus glycoprotein, central and dimerisation domains

ClanCL0543Viral_gly_cn_dm

External Links

ECOD PDB View: 1OKE RCSB PDB: 1OKE PDBe: 1OKE UniProt: P12823

Downloads

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