ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5F3X4_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5F3X4_nD1

Q5F3X4_nD1

UID: 004461513

AlphaFold

Range: 101-440
AlphaFold: AF-Q5F3X4
UniProt: Q5F3X4 (all domains)
Gene: EFTUD2

Protein: 116 kDa U5 small nuclear ribonucleoprotein component (Elongation factor Tu GTP-binding domain protein 2) (U5 snRNP-specific protein, 116 kDa) (U5-116 kDa)

3D Structure

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Related Domains

Browse other domains in GTP_EFTU →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyGTP_EFTU(2004.1.1.14)

Pfam Families

PF00009GTP_EFTU

Elongation factor Tu GTP binding domain

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: Q5F3X4 UniProt: Q5F3X4

Representative

This domain is classified based on similarity to:

Downloads

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Domain coordinates: residues 101-440