ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1qazA1 - ECOD Domain | ECOD

ECOD/Domains/e1qazA1

e1qazA1

UID: 000004471

RepresentativePDB

Range: A:4-354
PDB: 1QAZ chain A(all domains)
UniProt: Q9KWU1 (all domains)

Molecule: PROTEIN (ALGINATE LYASE A1-III)

3D Structure

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Related Domains

Browse other domains in Alginate_lyase →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupalpha/alpha toroid(109.2)

TT-groupalpha/alpha toroid(109.2.1)

FFamilyAlginate_lyase(109.2.1.17)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF05426Alginate_lyase

Alginate lyase

ClanCL00596_Hairpin

External Links

ECOD PDB View: 1QAZ RCSB PDB: 1QAZ PDBe: 1QAZ UniProt: Q9KWU1

Downloads

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