ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2sqcA1 - ECOD Domain | ECOD

ECOD/Domains/e2sqcA1

e2sqcA1

UID: 000004479

RepresentativePDB

Range: A:8-36,A:308-630
PDB: 2SQC chain A(all domains)
UniProt: P33247 (all domains)
Gene: shc

Molecule: SQUALENE-HOPENE CYCLASE

3D Structure

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Related Domains

Browse other domains in SQHop_cyclase_C →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupalpha/alpha toroid(109.2)

TT-groupalpha/alpha toroid(109.2.1)

FFamilySQHop_cyclase_C(109.2.1.32)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive ((Hydroxyethyloxy)Tri(Ethyloxy)Octane)

(Hydroxyethyloxy)Tri(Ethyloxy)OctaneC8E
DrugBank DB04233

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13243SQHop_cyclase_C

Squalene-hopene cyclase C-terminal domain

ClanCL00596_Hairpin

External Links

ECOD PDB View: 2SQC RCSB PDB: 2SQC PDBe: 2SQC UniProt: P33247

Downloads

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