ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5FKT3_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5FKT3_nD1

Q5FKT3_nD1

UID: 004481787

AlphaFold

Range: 1-70
AlphaFold: AF-Q5FKT3
UniProt: Q5FKT3 (all domains)
Gene: rpoY

Protein: DNA-directed RNA polymerase subunit epsilon (RNAP epsilon subunit) (EC 2.7.7.6) (RNA polymerase epsilon subunit) (Transcriptase subunit epsilon)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupGP2-like(3115)

HH-groupBacterial RNA polymerase subunit epsilon(3115.6)

TT-groupBacterial RNA polymerase subunit epsilon(3115.6.1)

FFamilyRpoY(3115.6.1.1)

Pfam Families

RNA polymerase epsilon subunit

External Links

AlphaFold DB: Q5FKT3 UniProt: Q5FKT3

Representative

This domain is classified based on similarity to:

Downloads

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Domain coordinates: residues 1-70