ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
RCSB PDB
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Q1JED6_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q1JED6_nD4

Q1JED6_nD4

UID: 004490744

AlphaFold

Range: 561-620
AlphaFold: AF-Q1JED6
UniProt: Q1JED6 (all domains)

3D Structure

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Related Domains

Browse other domains in GIDA_C →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHhH/H2TH(102)

HH-groupSAM/DNA-glycosylase(102.1)

TT-groupSAM domain-like(102.1.1)

FFamilyGIDA_C(102.1.1.26)

Pfam Families

PF13932SAM_GIDA_C

tRNA modifying enzyme MnmG/GidA C-terminal helical bundle

ClanCL0003SAM

External Links

AlphaFold DB: Q1JED6 UniProt: Q1JED6

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 561-620