ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1wu4A1 - ECOD Domain | ECOD

ECOD/Domains/e1wu4A1

e1wu4A1

UID: 000004498

RepresentativePDB

Range: A:6-381
PDB: 1WU4 chain A(all domains)
UniProt: Q9KB30 (all domains)
Gene: BH2105

Molecule: xylanase Y

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_8 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupalpha/alpha toroid(109.2)

TT-groupalpha/alpha toroid(109.2.1)

FFamilyGlyco_hydro_8(109.2.1.6)

Ligands

in contact, ≤ 4 Å

NICKEL (II) IONNI
metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01270Glyco_hydro_8

Glycosyl hydrolases family 8

ClanCL00596_Hairpin

External Links

ECOD PDB View: 1WU4 RCSB PDB: 1WU4 PDBe: 1WU4 UniProt: Q9KB30

Downloads

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