ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1r76A1 - ECOD Domain | ECOD

ECOD/Domains/e1r76A1

e1r76A1

UID: 000004510

RepresentativePDB

Range: A:25-432
PDB: 1R76 chain A(all domains)
UniProt: Q9X592 (all domains)
Gene: pelA

Molecule: pectate lyase

3D Structure

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Related Domains

Browse other domains in Pec_lyase →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupalpha/alpha toroid(109.2)

TT-groupalpha/alpha toroid(109.2.1)

FFamilyPec_lyase(109.2.1.29)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
MERCURY (II) IONHG
metal

+ 2 additives (Glycerin, Isopropyl alcohol)

GlycerinGOL

Pfam Families

PF09492Pec_lyase

Pectic acid lyase

ClanCL00596_Hairpin

External Links

ECOD PDB View: 1R76 RCSB PDB: 1R76 PDBe: 1R76 UniProt: Q9X592

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Isopropyl alcoholIPA

DrugBank DB02325

Shown in the structure viewer. Drug annotations from DrugDomain.