ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A2ALV5_nD4 - ECOD Domain | ECOD

ECOD/Domains/A2ALV5_nD4

A2ALV5_nD4

UID: 004515218

AlphaFold

Range: 1096-1155
AlphaFold: AF-A2ALV5
UniProt: A2ALV5 (all domains)
Gene: Shoc1

Protein: Protein shortage in chiasmata 1 ortholog (EC 3.6.-.-) (Protein ZIP2 homolog) (MZip2)

3D Structure

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Related Domains

Browse other domains in SHOC1_HhH_tandem →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHhH/H2TH(102)

HH-groupSAM/DNA-glycosylase(102.1)

TT-groupSAM domain-like(102.1.1)

FFamilySHOC1_HhH_tandem(102.1.1.125)

Pfam Families

PF29917SHOC1_HhH_tandem

SHOC1 helix-hairpin-helix tandem

ClanCL0198HHH

External Links

AlphaFold DB: A2ALV5 UniProt: A2ALV5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1096-1155