ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1dceA2 - ECOD Domain | ECOD

ECOD/Domains/e1dceA2

e1dceA2

UID: 000004534

RepresentativePDB

Range: A:1-241,A:351-443
PDB: 1DCE chain A(all domains)
UniProt: Q08602 (all domains)
Gene: Rabggta

Molecule: PROTEIN (RAB GERANYLGERANYLTRANSFERASE ALPHA SUBUNIT)

3D Structure

Loading viewer...

Related Domains

Browse other domains in PPTA →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPPTA(109.4.1.18)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Protein prenyltransferase alpha subunit repeat

ClanCL0020TPR

External Links

ECOD PDB View: 1DCE RCSB PDB: 1DCE PDBe: 1DCE UniProt: Q08602

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure