ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1qsaA1 - ECOD Domain | ECOD

ECOD/Domains/e1qsaA1

e1qsaA1

UID: 000004548

RepresentativePDB

Range: A:1-450
PDB: 1QSA chain A(all domains)
UniProt: P0AGC3 (all domains)
Gene: slt

Molecule: PROTEIN (SOLUBLE LYTIC TRANSGLYCOSYLASE SLT70)

3D Structure

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Related Domains

Browse other domains in SLT_L →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilySLT_L(109.4.1.216)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Acetate, Glycerin, Sulfate ion)

AcetateACT
DrugBank DB14511
GlycerinGOL
DrugBank DB09462
Sulfate ion

Pfam Families

Soluble lytic murein transglycosylase L domain

ClanCL0020TPR

External Links

ECOD PDB View: 1QSA RCSB PDB: 1QSA PDBe: 1QSA UniProt: P0AGC3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.