ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5VXU9_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5VXU9_nD1

Q5VXU9_nD1

UID: 004548132

AlphaFold

Range: 581-715,841-870
AlphaFold: AF-Q5VXU9
UniProt: Q5VXU9 (all domains)
Gene: SHOC1

Protein: Protein shortage in chiasmata 1 ortholog (EC 3.6.-.-) (Protein ZIP2 homolog) (MZIP2)

3D Structure

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Related Domains

Browse other domains in DUF5587 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupHelical bundle insertion in helicase domains(3930)

HH-groupHelical bundle in Hef helicase(3930.1)

TT-groupHelical bundle in Hef helicase(3930.1.1)

FFamilyDUF5587(3930.1.1.10)

Pfam Families

PF17825SHOC1_ATPase

SHOC1 ATPase domain

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: Q5VXU9 UniProt: Q5VXU9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 581-715,841-870