ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q5PDG5_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5PDG5_nD1

Q5PDG5_nD1

UID: 004558791

AlphaFold

Range: 6-150,251-330,521-550
AlphaFold: AF-Q5PDG5
UniProt: Q5PDG5 (all domains)

3D Structure

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Related Domains

Browse other domains in SgrR_N →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilySgrR_N(101.1.2.274)

Pfam Families

Sugar transport-related sRNA regulator N-term

ClanCL0123HTH

External Links

AlphaFold DB: Q5PDG5 UniProt: Q5PDG5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-150,251-330,521-550