ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1j2xA1 - ECOD Domain | ECOD

ECOD/Domains/e1j2xA1

e1j2xA1

UID: 000045802

PDB

Range: A:445-517
PDB: 1J2X chain A(all domains)
UniProt: P35269 (all domains)
Gene: GTF2F1

Molecule: Transcription initiation factor IIF, alpha subunit

3D Structure

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Related Domains

Browse other domains in TFIIF_alpha →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyTFIIF_alpha(101.1.2.75)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF05793TFIIF_alpha

Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)

ClanCL0123HTH

External Links

ECOD PDB View: 1J2X RCSB PDB: 1J2X PDBe: 1J2X UniProt: P35269

Downloads

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