ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q6FF50_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q6FF50_nD1

Q6FF50_nD1

UID: 004585885

AlphaFold

Range: 6-80
AlphaFold: AF-Q6FF50
UniProt: Q6FF50 (all domains)
Gene: rlmB

Protein: 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB (EC 2.1.1.185) (23S rRNA (guanosine2251 2'-O)-methyltransferase) (23S rRNA Gm2251 2'-O-methyltransferase)

3D Structure

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Related Domains

Browse other domains in SpoU_sub_bind →

Classification

AArchitecturea+b three layers(a.12)

XX-groupBacillus chorismate mutase-like(301)

HH-groupL30e-like(301.1)

TT-groupL30e-like(301.1.1)

FFamilySpoU_sub_bind(301.1.1.5)

Pfam Families

PF08032SpoU_sub_bind

RNA 2'-O ribose methyltransferase substrate binding

ClanCL0101PELOTA

External Links

AlphaFold DB: Q6FF50 UniProt: Q6FF50

Representative

This domain is classified based on similarity to:

Downloads

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Domain coordinates: residues 6-80