ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1bi3B1 - ECOD Domain | ECOD

ECOD/Domains/e1bi3B1

e1bi3B1

UID: 000045930

PDB

Range: B:4-64
PDB: 1BI3 chain B(all domains)
UniProt: P0DJL7 (all domains)
Gene: dtxR

Molecule: DIPHTHERIA TOXIN REPRESSOR

3D Structure

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Related Domains

Browse other domains in Fe_dep_repress →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyFe_dep_repress(101.1.2.21)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01325Fe_dep_repress

Iron dependent repressor, N-terminal DNA binding domain

ClanCL0123HTH

External Links

ECOD PDB View: 1BI3 RCSB PDB: 1BI3 PDBe: 1BI3 UniProt: P0DJL7

Downloads

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