ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1m8zA1 - ECOD Domain | ECOD

ECOD/Domains/e1m8zA1

e1m8zA1

UID: 000004604

RepresentativePDB

Range: A:828-1166
PDB: 1M8Z chain A(all domains)
UniProt: Q14671 (all domains)
Gene: PUM1

Molecule: PUMILIO 1

3D Structure

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Related Domains

Browse other domains in PUF, PUF_NOP9 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPUF, PUF_NOP9(109.4.1.1265)

Ligands

in contact, ≤ 4 Å

MercaptoethanolBME
drugDrugBank DB03345

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Pumilio-family RNA binding repeat

ClanCL0020TPR

PF22493PUF_NOP9

NOP9-like PUF repeat domain

ClanCL0020TPR

External Links

ECOD PDB View: 1M8Z RCSB PDB: 1M8Z PDBe: 1M8Z UniProt: Q14671

Downloads

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