ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1jdbE1 - ECOD Domain | ECOD

ECOD/Domains/e1jdbE1

e1jdbE1

UID: 000046087

PDB

Range: E:403-554
PDB: 1JDB chain E(all domains)
UniProt: P00968 (all domains)
Gene: carB

Molecule: CARBAMOYL PHOSPHATE SYNTHETASE

3D Structure

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Related Domains

Browse other domains in CPSase_L_D3 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyCPSase_L_D3(101.1.2.40)

Ligands

in contact, ≤ 4 Å

L-GlutamineGLN
drugDrugBank DB00130
Chloride ionCL
Potassium ionK

Pfam Families

PF02787CPSase_L_D3

Carbamoyl-phosphate synthetase large chain, oligomerisation domain

ClanCL0123HTH

External Links

ECOD PDB View: 1JDB RCSB PDB: 1JDB PDBe: 1JDB UniProt: P00968

Downloads

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metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.