ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
RCSB PDB
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B5EZ88_nD1 - ECOD Domain | ECOD

ECOD/Domains/B5EZ88_nD1

B5EZ88_nD1

UID: 004621944

AlphaFold

Range: 16-175
AlphaFold: AF-B5EZ88
UniProt: B5EZ88 (all domains)

3D Structure

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Related Domains

Browse other domains in LptE →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupTolB, N-terminal domain(7503)

HH-groupTolB, N-terminal domain(7503.1)

TT-groupTolB, N-terminal domain(7503.1.1)

FFamilyLptE(7503.1.1.4)

Pfam Families

Lipopolysaccharide-assembly

ClanCL0342TolB_N

External Links

AlphaFold DB: B5EZ88 UniProt: B5EZ88

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 16-175