ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5R4A6_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5R4A6_nD1

Q5R4A6_nD1

UID: 004621966

AlphaFold

Range: 1-214,236-315,341-360
AlphaFold: AF-Q5R4A6
UniProt: Q5R4A6 (all domains)

3D Structure

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Related Domains

Browse other domains in Peptidase_M54 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M54(2498.1.1.35)

Pfam Families

PF07998Peptidase_M54

Peptidase family M54

ClanCL0126Peptidase_MA

External Links

AlphaFold DB: Q5R4A6 UniProt: Q5R4A6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-214,236-315,341-360