ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1lshA3 - ECOD Domain | ECOD

ECOD/Domains/e1lshA3

e1lshA3

UID: 000004625

RepresentativePDB

Range: A:285-620
PDB: 1LSH chain A(all domains)
UniProt: Q91062 (all domains)

Molecule: LIPOVITELLIN (LV-1N, LV-1C)

3D Structure

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Related Domains

Browse other domains in Vitellogenin_N →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyVitellogenin_N(109.4.1.19)

Ligands

in contact, ≤ 4 Å

di-heneicosanoyl phosphatidyl cholinePLD
Unknown branched fragment of phospholipidUPL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01347TPR_Vitellogenin

Vitellogenin TPR domain

ClanCL0020TPR

External Links

ECOD PDB View: 1LSH RCSB PDB: 1LSH PDBe: 1LSH UniProt: Q91062

Downloads

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