ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q6C4J0_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q6C4J0_nD2

Q6C4J0_nD2

UID: 004649118

AlphaFold

Range: 66-225,251-485
AlphaFold: AF-Q6C4J0
UniProt: Q6C4J0 (all domains)

3D Structure

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Related Domains

Browse other domains in DNA_pol_B_exo1, DNA_pol_B_exo2 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyDNA_pol_B_exo1, DNA_pol_B_exo2(2484.1.1.197)

Pfam Families

PF03104DNA_pol_B_exo1

DNA polymerase family B, exonuclease domain

ClanCL0219RNase_H

PF10108DNA_pol_B_exo2

Predicted 3'-5' exonuclease related to the exonuclease domain of PolB

ClanCL0219RNase_H

External Links

AlphaFold DB: Q6C4J0 UniProt: Q6C4J0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 66-225,251-485