ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1t8iA2 - ECOD Domain | ECOD

ECOD/Domains/e1t8iA2

e1t8iA2

UID: 000046615

PDB

Range: A:431-583
PDB: 1T8I chain A(all domains)
UniProt: P11387 (all domains)
Gene: TOP1

Molecule: DNA topoisomerase I

3D Structure

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Related Domains

Browse other domains in Topoisom_I →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupDNA breaking-rejoining enzymes(101.1.8)

FFamilyTopoisom_I(101.1.8.2)

Ligands

in contact, ≤ 4 Å

CamptothecinEHD
drugDrugBank DB04690

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01028Topoisom_I

Eukaryotic DNA topoisomerase I, catalytic core

ClanCL0382DNA-mend

External Links

ECOD PDB View: 1T8I RCSB PDB: 1T8I PDBe: 1T8I UniProt: P11387

Downloads

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