ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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B5YJ55_nD2 - ECOD Domain | ECOD

ECOD/Domains/B5YJ55_nD2

B5YJ55_nD2

UID: 004669613

AlphaFold

Range: 106-270
AlphaFold: AF-B5YJ55
UniProt: B5YJ55 (all domains)

3D Structure

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Related Domains

Browse other domains in Shikimate_DH,SDH_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyShikimate_DH,SDH_C(2003.1.1.25)

Pfam Families

PF01488Shikimate_DH

Shikimate / quinate 5-dehydrogenase

ClanCL0063NADP_Rossmann

Shikimate 5'-dehydrogenase C-terminal domain

External Links

AlphaFold DB: B5YJ55 UniProt: B5YJ55

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 106-270