ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A4FYB1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A4FYB1_nD2

A4FYB1_nD2

UID: 004677169

AlphaFold

Range: 346-535
AlphaFold: AF-A4FYB1
UniProt: A4FYB1 (all domains)
Gene: sepS

Protein: O-phosphoserine--tRNA(Cys) ligase (O-phosphoserine--tRNA ligase) (EC 6.1.1.27) (Non-canonical O-phosphoseryl-tRNA(Cys) synthetase) (O-phosphoseryl-tRNA(Cys) synthetase) (SepRS)

3D Structure

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Related Domains

Browse other domains in SepRS_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupO-phosphoseryl-tRNA synthetase C-terminal domain(304.135)

TT-groupO-phosphoseryl-tRNA synthetase C-terminal domain(304.135.1)

FFamilySepRS_C(304.135.1.1)

Pfam Families

PF18006SepRS_C

O-phosphoseryl-tRNA synthetase C-terminal domain

External Links

AlphaFold DB: A4FYB1 UniProt: A4FYB1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 346-535