ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ppjD2 - ECOD Domain | ECOD

ECOD/Domains/e1ppjD2

e1ppjD2

UID: 000004723

RepresentativePDB

Range: D:196-241
PDB: 1PPJ chain D(all domains)
UniProt: P00125 (all domains)
Gene: CYC1

Molecule: Cytochrome c1, heme protein, mitochondrial

3D Structure

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Related Domains

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Classification

AArchitecture—

XX-group—

HH-group—

TT-group—

FFamily—

Ligands

in contact, ≤ 4 Å

Tetrastearoyl cardiolipinCDL
drugDrugBank DB03429
PhosphatidylethanolaminePEE
drugDrugBank DB04327

External Links

ECOD PDB View: 1PPJ RCSB PDB: 1PPJ PDBe: 1PPJ UniProt: P00125

Downloads

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Azide ion

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.