ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1q90R1 - ECOD Domain | ECOD

ECOD/Domains/e1q90R1

e1q90R1

UID: 000004727

RepresentativePDB

Range: R:33-71
PDB: 1Q90 chain R(all domains)
UniProt: P49728 (all domains)
Gene: petC

Molecule: Cytochrome B6-F complex iron-sulfur subunit

3D Structure

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Related Domains

Browse other domains in TM_PetC →

Classification

AArchitectureextended segments(a.20)

XX-groupiron-sulfur subunit (ISP) transmembrane anchor(5014)

HH-groupiron-sulfur subunit (ISP) transmembrane anchor(5014.1)

TT-groupiron-sulfur subunit (ISP) transmembrane anchor(5014.1.1)

FFamilyTM_PetC(5014.1.1.4)

Ligands

in contact, ≤ 4 Å

EicosaneLFA
1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROLSQD

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF25471TM_PetC

Iron-sulfur subunit PetC transmembrane anchor

External Links

ECOD PDB View: 1Q90 RCSB PDB: 1Q90 PDBe: 1Q90 UniProt: P49728

Downloads

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