ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1i3qJ1 - ECOD Domain | ECOD

ECOD/Domains/e1i3qJ1

e1i3qJ1

UID: 000047270

PDB

Range: J:1-65
PDB: 1I3Q chain J(all domains)
UniProt: P22139 (all domains)
Gene: RPB10

Molecule: DNA-DIRECTED RNA POLYMERASE II 8.3KD POLYPEPTIDE

3D Structure

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Related Domains

Browse other domains in RNA_pol_N →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupRPB10(101.4)

TT-groupRPB10(101.4.1)

FFamilyRNA_pol_N(101.4.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01194RNA_pol_N

RNA polymerases N / 8 kDa subunit

External Links

ECOD PDB View: 1I3Q RCSB PDB: 1I3Q PDBe: 1I3Q UniProt: P22139

Downloads

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