ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1jm6B2 - ECOD Domain | ECOD

ECOD/Domains/e1jm6B2

e1jm6B2

UID: 000472827

PDB

Range: B:1177-1365
PDB: 1JM6 chain B(all domains)
UniProt: Q64536 (all domains)
Gene: Pdk2

Molecule: Pyruvate dehydrogenase kinase, isozyme 2

3D Structure

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Related Domains

Browse other domains in HATPase_c →

Classification

AArchitecturea+b two layers(a.11)

XX-groupATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like(225)

HH-groupATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase(225.1)

TT-groupATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase(225.1.1)

FFamilyHATPase_c(225.1.1.3)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02518HATPase_c

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

ClanCL0025His_Kinase_A

External Links

ECOD PDB View: 1JM6 RCSB PDB: 1JM6 PDBe: 1JM6 UniProt: Q64536

Downloads

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