ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1nmeB01 - ECOD Domain | ECOD

ECOD/Domains/e1nmeB01

e1nmeB01

UID: 004768900

PDB

Range: B:186-277
PDB: 1NME chain B(all domains)

Molecule: Caspase-3

3D Structure

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Related Domains

Browse other domains in Peptidase_C14 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupCaspase-like(7575)

HH-groupCaspase-like(7575.1)

TT-groupCaspase-like(7575.1.1)

FFamilyPeptidase_C14(7575.1.1.1)

Ligands

in contact, ≤ 4 Å

3-(2-MERCAPTO-ACETYLAMINO)-4-OXO-PENTANOIC ACID158
2-HYDROXY-5-(2-MERCAPTO-ETHYLSULFAMOYL)-BENZOIC ACID159

Shown in the structure viewer.

Pfam Families

PF00656Peptidase_C14

Caspase domain

ClanCL0093Peptidase_CD

External Links

ECOD PDB View: 1NME RCSB PDB: 1NME PDBe: 1NME

Downloads

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