ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1m0oA2 - ECOD Domain | ECOD

ECOD/Domains/e1m0oA2

e1m0oA2

UID: 000478976

PDB

Range: A:3-325
PDB: 1M0O chain A(all domains)
UniProt: P16932 (all domains)
Gene: dgdA

Molecule: 2,2-Dialkylglycine decarboxylase

3D Structure

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Related Domains

Browse other domains in Aminotran_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilyAminotran_3(7577.1.1.2)

Ligands

in contact, ≤ 4 Å

Potassium ionK
metal
(1R)-1-[((1E)-{3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYLENE)AMINO]-1-METHYLPROPYLPHOSPHONIC ACIDMPM
Sodium ionNA

Pfam Families

PF00202Aminotran_3

Aminotransferase class-III

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 1M0O RCSB PDB: 1M0O PDBe: 1M0O UniProt: P16932

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.