ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7tolA01 - ECOD Domain | ECOD

ECOD/Domains/e7tolA01

e7tolA01

UID: 004824279

PDB

Range: A:92-364
PDB: 7TOL chain A(all domains)

Molecule: glycerol dibiphytanyl glycerol tetraether - macrocyclic archaeol synthase

3D Structure

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Related Domains

Browse other domains in Radical_SAM →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyRadical_SAM(2002.1.1.120)

Ligands

in contact, ≤ 4 Å

5'-DEOXYADENOSINE5AD
3-PHOSPHORYL-[1,2-DI-PHYTANYL]GLYCEROLL1P
3-[GLYCEROLYLPHOSPHONYL]-[1,2-DI-PHYTANYL]GLYCEROLL4P
MethionineMET
Iron/sulfur clusterSF4

+ 1 additive (Triethylene glycol)

Triethylene glycol

Pfam Families

PF04055Radical_SAM

Radical SAM superfamily

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 7TOL RCSB PDB: 7TOL PDBe: 7TOL

Downloads

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