ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1u3dA1 - ECOD Domain | ECOD

ECOD/Domains/e1u3dA1

e1u3dA1

UID: 000004829

RepresentativePDB

Range: A:198-497
PDB: 1U3D chain A(all domains)
UniProt: Q43125 (all domains)
Gene: CRY1

Molecule: Cryptochrome 1 apoprotein

3D Structure

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Related Domains

Browse other domains in FAD_binding_7 →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupCryptochrome/photolyase FAD-binding domain-related(182)

HH-groupCryptochrome/photolyase FAD-binding domain-related(182.1)

TT-groupCryptochrome/photolyase FAD-binding domain(182.1.1)

FFamilyFAD_binding_7(182.1.1.1)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
Ethyl Dimethyl Ammonio Propane SulfonateNDS
drugDrugBank DB02618

Pfam Families

PF03441FAD_binding_7

FAD binding domain of DNA photolyase

External Links

ECOD PDB View: 1U3D RCSB PDB: 1U3D PDBe: 1U3D UniProt: Q43125

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Phosphoaminophosphonic acid-adenylate esterANP

Chloride ionCL

Magnesium ionMG

metal

Shown in the structure viewer. Drug annotations from DrugDomain.