ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8co5A02 - ECOD Domain | ECOD

ECOD/Domains/e8co5A02

e8co5A02

UID: 004838662

PDB

Range: A:150-337
PDB: 8CO5 chain A(all domains)

Molecule: Bacteriophytochrome protein

3D Structure

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Related Domains

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Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupsensor domains(223.1)

TT-groupsensor domains(223.1.1)

FFamilyGAF(223.1.1.3)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
3-[5-[(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-2-[[5-[(3-ethyl-4-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{H}-pyrrol-2-yl]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acidV8U

Shown in the structure viewer.

Pfam Families

GAF domain

ClanCL0161GAF

External Links

ECOD PDB View: 8CO5 RCSB PDB: 8CO5 PDBe: 8CO5

Downloads

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