ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8dyeA01 - ECOD Domain | ECOD

ECOD/Domains/e8dyeA01

e8dyeA01

UID: 004841990

PDB

Range: A:54-160,A:224-320,A:449-525
PDB: 8DYE chain A(all domains)

Molecule: Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial

3D Structure

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Related Domains

Browse other domains in FAD_binding_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFAD/NAD(P)-binding domain(2003.1.2)

FFamilyFAD_binding_2(2003.1.2.7)

Ligands

in contact, ≤ 4 Å

Flavin-adenine dinucleotideFAD
Sodium ionNA
metal

+ 3 additives (1,2-ETHANEDIOL, Glycerol, Malonate ion)

1,2-ETHANEDIOLEDO
GlycerolGOL
Malonate ionMLI

Pfam Families

PF00890FAD_binding_2

FAD binding domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 8DYE RCSB PDB: 8DYE PDBe: 8DYE

Downloads

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