ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8p1qA02 - ECOD Domain | ECOD

ECOD/Domains/e8p1qA02

e8p1qA02

UID: 004859920

PDB

Range: A:581-647
PDB: 8P1Q chain A(all domains)

Molecule: Ubiquitin carboxyl-terminal hydrolase 28

3D Structure

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Related Domains

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Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyUCH(219.1.1.3)

Ligands

in contact, ≤ 4 Å

3-azanyl-N-[(2S)-6-[(1S,5R)-3,8-diazabicyclo[3.2.1]octan-3-yl]-1,2,3,4-tetrahydronaphthalen-2-yl]-6-methyl-thieno[2,3-b]pyridine-2-carboxamideWFT

+ 1 additive (Dimethyl sulfoxide)

Dimethyl sulfoxideDMS

Shown in the structure viewer.

Pfam Families

Ubiquitin carboxyl-terminal hydrolase

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 8P1Q RCSB PDB: 8P1Q PDBe: 8P1Q

Downloads

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