ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1nvmE1 - ECOD Domain | ECOD

ECOD/Domains/e1nvmE1

e1nvmE1

UID: 000048690

PDB

Range: E:291-339
PDB: 1NVM chain E(all domains)
UniProt: P51016 (all domains)
Gene: dmpG

Molecule: 4-hydroxy-2-oxovalerate aldolase

3D Structure

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Related Domains

Browse other domains in DmpG_comm →

Classification

AArchitecturealpha arrays(a.6)

XX-groupRuvA-C(103)

HH-grouppost-HMGL domain-like(103.5)

TT-grouppost-HMGL domain-like(103.5.1)

FFamilyDmpG_comm(103.5.1.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Sulfate ion, Oxalate ion)

Sulfate ionSO4
DrugBank DB14546
Oxalate ionOXL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07836DmpG_comm

DmpG-like communication domain

ClanCL0597Post-HMGL

External Links

ECOD PDB View: 1NVM RCSB PDB: 1NVM PDBe: 1NVM UniProt: P51016

Downloads

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