ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8uk6A05 - ECOD Domain | ECOD

ECOD/Domains/e8uk6A05

e8uk6A05

UID: 004872438

PDB

Range: A:608-671,A:674-687,A:691-703
PDB: 8UK6 chain A(all domains)

Molecule: glutamine--tRNA ligase

3D Structure

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Related Domains

Browse other domains in tRNA-synt_1c_C →

Classification

AArchitecturebeta barrels(a.1)

XX-groupRibosomal protein L25-like(239)

HH-groupRibosomal protein L25-like(239.1)

TT-groupRibosomal protein L25-like(239.1.1)

FFamilytRNA-synt_1c_C(239.1.1.5)

Ligands

in contact, ≤ 4 Å

(2E)-N-(pyrimidin-2-yl)-3-(thiophen-2-yl)prop-2-enamideWVK

Shown in the structure viewer.

Pfam Families

PF03950tRNA-synt_1c_C

tRNA synthetases class I (E and Q), anti-codon binding domain

ClanCL0733Ribosomal_L25

External Links

ECOD PDB View: 8UK6 RCSB PDB: 8UK6 PDBe: 8UK6

Downloads

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