ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8vcwA01 - ECOD Domain | ECOD

ECOD/Domains/e8vcwA01

e8vcwA01

UID: 004873605

PDB

Range: A:39-316
PDB: 8VCW chain A(all domains)

Molecule: Biotin synthase

3D Structure

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Related Domains

Browse other domains in Radical_SAM,BATS →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyRadical_SAM,BATS(2002.1.1.122)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
6-(5-METHYL-2-OXO-IMIDAZOLIDIN-4-YL)-HEXANOIC ACIDDTB
FE (III) IONFE
metal
Fe4 H S5Q46
S-adenosylmethionineSAM
Iron/sulfur cluster

Pfam Families

PF04055Radical_SAM

Radical SAM superfamily

ClanCL0036TIM_barrel

Biotin and Thiamin Synthesis associated domain

External Links

ECOD PDB View: 8VCW RCSB PDB: 8VCW PDBe: 8VCW

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL)

2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOLBTB

Shown in the structure viewer.