ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8vdkA02 - ECOD Domain | ECOD

ECOD/Domains/e8vdkA02

e8vdkA02

UID: 004873644

PDB

Range: A:155-319
PDB: 8VDK chain A(all domains)

Molecule: Serine-aspartate repeat-containing protein D

3D Structure

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Related Domains

Browse other domains in SdrG_C_C →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupCommon fold of diphtheria toxin/transcription factors/cytochrome f(11.1.5)

FFamilySdrG_C_C(11.1.5.38)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (1,2-ETHANEDIOL, Glycerol)

1,2-ETHANEDIOLEDO
GlycerolGOL

Shown in the structure viewer.

Pfam Families

PF10425SdrG_C_C

C-terminus of bacterial fibrinogen-binding adhesin

ClanCL0204Adhesin

External Links

ECOD PDB View: 8VDK RCSB PDB: 8VDK PDBe: 8VDK

Downloads

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