ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9berB01 - ECOD Domain | ECOD

ECOD/Domains/e9berB01

e9berB01

UID: 004880126

PDB

Range: B:512-664
PDB: 9BER chain B(all domains)

Molecule: Envelope glycoprotein gp41

3D Structure

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Related Domains

Browse other domains in GP41 →

Classification

AArchitecturea+b duplicates or obligate multimers(a.15)

XX-groupMPER trimer(3567)

HH-groupMPER trimer(3567.1)

TT-groupMPER trimer(3567.1.1)

FFamilyGP41(3567.1.1.2)

Ligands

in contact, ≤ 4 Å

2-acetamido-2-deoxy-beta-D-glucopyranoseNAG

Shown in the structure viewer.

Pfam Families

Retroviral envelope protein

External Links

ECOD PDB View: 9BER RCSB PDB: 9BER PDBe: 9BER

Downloads

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