ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e9eu5A05 - ECOD Domain | ECOD

ECOD/Domains/e9eu5A05

e9eu5A05

UID: 004882195

PDB

Range: A:538-858
PDB: 9EU5 chain A(all domains)

Molecule: Isoform 2 of Ectonucleotide pyrophosphatase/phosphodiesterase family member 2

3D Structure

Loading viewer...

Related Domains

Browse other domains in Endonuclease_NS →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupHis-Me finger endonucleases(378)

HH-groupHis-Me finger endonucleases(378.1)

TT-groupHis-Me finger endonucleases(378.1.1)

FFamilyEndonuclease_NS(378.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Iodide ionIOD
Sodium ionNA
metal
Zinc ionZN
metal

+ 1 additive (Glycerol)

Pfam Families

PF01223Endonuclease_NS

DNA/RNA non-specific endonuclease

ClanCL0263His-Me_finger

External Links

ECOD PDB View: 9EU5 RCSB PDB: 9EU5 PDBe: 9EU5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerolGOL

Shown in the structure viewer.