ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e9jxsB01 - ECOD Domain | ECOD

ECOD/Domains/e9jxsB01

e9jxsB01

UID: 004884072

PDB

Range: B:1-287
PDB: 9JXS chain B(all domains)

Molecule: CRISPR system Cascade subunit CasD

3D Structure

Loading viewer...

Related Domains

Browse other domains in Cas_Cas5d →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupCRISPR system Cas5 homologs(304.158)

TT-groupCRISPR system Cas5 homologs(304.158.1)

FFamilyCas_Cas5d(304.158.1.2)

Pfam Families

PF09704Cas_Cas5d

CRISPR-associated protein (Cas_Cas5)

ClanCL0362RAMPS-Cas5-like

External Links

ECOD PDB View: 9JXS RCSB PDB: 9JXS PDBe: 9JXS

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure