ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9kqp701 - ECOD Domain | ECOD

ECOD/Domains/e9kqp701

e9kqp701

UID: 004884176

PDB

Range: 7:72-256
PDB: 9KQP chain 7(all domains)

Molecule: Chlorophyll a-b binding protein, chloroplastic

3D Structure

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Related Domains

Browse other domains in Chloroa_b-bind →

Classification

AArchitectureextended segments(a.20)

XX-groupChlorophyll a-b binding protein(5077)

HH-groupChlorophyll a-b binding protein(5077.1)

TT-groupChlorophyll a-b binding protein(5077.1.1)

FFamilyChloroa_b-bind(5077.1.1.1)

Ligands

in contact, ≤ 4 Å

1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE3PH
Beta-caroteneBCR
Chlorophyll bCHL
Chlorophyll aCLA
DIGALACTOSYL DIACYL GLYCEROL (DGDG)DGD
1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLELHG

Pfam Families

PF00504Chloroa_b-bind

Chlorophyll A-B binding protein

External Links

ECOD PDB View: 9KQP RCSB PDB: 9KQP PDBe: 9KQP

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOLLUT

PhosphatidylethanolaminePTY

(3~{E},5~{E},7~{E})-6-methyl-8-[(6~{R})-2,2,6-trimethylcyclohexyl]octa-3,5,7-trien-2-oneQTB

Unknown ligandUNL

(3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOLXAT

Shown in the structure viewer.