ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9omlB1 - ECOD Domain | ECOD

ECOD/Domains/e9omlB1

e9omlB1

UID: 004889302

PDB

Range: B:3-242
PDB: 9OML chain B(all domains)

Molecule: Glycosyltransferase

3D Structure

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Related Domains

Browse other domains in Glycos_transf_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNucleotide-diphospho-sugar transferases(7516)

HH-groupNucleotide-diphospho-sugar transferases(7516.1)

TT-groupNucleotide-diphospho-sugar transferases(7516.1.1)

FFamilyGlycos_transf_2(7516.1.1.2)

Ligands

in contact, ≤ 4 Å

GUANOSINE-5'-MONOPHOSPHATE5GP
2-O-acetyl-6-deoxy-alpha-D-talopyranoseA1CCW
beta-D-glucopyranoseBGC
alpha-L-fucopyranoseFUC
OCTAN-1-OLOC9

+ 1 additive (Dimethyl sulfoxide)

Dimethyl sulfoxide

Pfam Families

PF00535Glycos_transf_2

Glycosyl transferase family 2

ClanCL0110GT-A

External Links

ECOD PDB View: 9OML RCSB PDB: 9OML PDBe: 9OML

Downloads

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