ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9r51A2 - ECOD Domain | ECOD

ECOD/Domains/e9r51A2

e9r51A2

UID: 004889916

PDB

Range: A:52-94,A:328-361
PDB: 9R51 chain A(all domains)

Molecule: F420-reducing [NiFe]-hydrogenase from Methanothermococcus thermolithotrophicus subunit alpha

3D Structure

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Related Domains

Browse other domains in NiFeSe_Hases →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFAD-linked reductases, C-terminal domain-like(244)

HH-groupNi-Fe binding domain in nickel-iron hydrogenase large subunit(244.4)

TT-groupNi-Fe binding domain in nickel-iron hydrogenase large subunit(244.4.1)

FFamilyNiFeSe_Hases(244.4.1.2)

Ligands

in contact, ≤ 4 Å

CARBONMONOXIDE-(DICYANO) IRONFCO
FE (III) IONFE
metal
NICKEL (II) IONNI
metal
Iron/sulfur clusterSF4

+ 1 additive (Glycerol)

Glycerol

Pfam Families

PF00374NiFeSe_Hases

Nickel-dependent hydrogenase

External Links

ECOD PDB View: 9R51 RCSB PDB: 9R51 PDBe: 9R51

Downloads

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