ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8zsnC11 - ECOD Domain | ECOD

ECOD/Domains/e8zsnC11

e8zsnC11

UID: 004894279

PDB

Range: C1:1-514
PDB: 8ZSN chain C1(all domains)

Molecule: Cytochrome c oxidase subunit 1

3D Structure

Loading viewer...

Related Domains

Browse other domains in COX1 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupCytochrome c oxidase subunit I-like(5038)

HH-groupCytochrome c oxidase subunit I-like(5038.1)

TT-groupCytochrome c oxidase subunit I-like(5038.1.1)

FFamilyCOX1(5038.1.1.1)

Ligands

in contact, ≤ 4 Å

1,2-Distearoyl-sn-glycerophosphoethanolamine3PE
COPPER (II) IONCU
metal
Heme-aHEA
Magnesium ionMG
metal
1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINEPC1

Pfam Families

Cytochrome C and Quinol oxidase polypeptide I

ClanCL0714COX1-like

External Links

ECOD PDB View: 8ZSN RCSB PDB: 8ZSN PDBe: 8ZSN

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOLPLX

Shown in the structure viewer.