ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8zsoC11 - ECOD Domain | ECOD

ECOD/Domains/e8zsoC11

e8zsoC11

UID: 004894280

PDB

Range: C1:1-514
PDB: 8ZSO chain C1(all domains)

Molecule: Cytochrome c oxidase subunit 1

3D Structure

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Related Domains

Browse other domains in COX1 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupCytochrome c oxidase subunit I-like(5038)

HH-groupCytochrome c oxidase subunit I-like(5038.1)

TT-groupCytochrome c oxidase subunit I-like(5038.1.1)

FFamilyCOX1(5038.1.1.1)

Ligands

in contact, ≤ 4 Å

1,2-Distearoyl-sn-glycerophosphoethanolamine3PE
COPPER (II) IONCU
metal
Heme-aHEA
Magnesium ionMG
metal
1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINEPC1

Pfam Families

Cytochrome C and Quinol oxidase polypeptide I

ClanCL0714COX1-like

External Links

ECOD PDB View: 8ZSO RCSB PDB: 8ZSO PDBe: 8ZSO

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOLPLX

Shown in the structure viewer.