ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9fksg1 - ECOD Domain | ECOD

ECOD/Domains/e9fksg1

e9fksg1

UID: 004895948

PDB

Range: g:11-554
PDB: 9FKS chain g(all domains)

Molecule: Cytochrome c oxidase subunit 1

3D Structure

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Related Domains

Browse other domains in COX1 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupCytochrome c oxidase subunit I-like(5038)

HH-groupCytochrome c oxidase subunit I-like(5038.1)

TT-groupCytochrome c oxidase subunit I-like(5038.1.1)

FFamilyCOX1(5038.1.1.1)

Ligands

in contact, ≤ 4 Å

1,2-Distearoyl-sn-glycerophosphoethanolamine3PE
1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE3PH
Calcium ionCA
metal
COPPER (II) IONCU
metal
Heme-aHEA

Pfam Families

Cytochrome C and Quinol oxidase polypeptide I

ClanCL0714COX1-like

External Links

ECOD PDB View: 9FKS RCSB PDB: 9FKS PDBe: 9FKS

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

MANGANESE (II) IONMN

metal

1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINEPC1

Shown in the structure viewer.